陈楠生，研究员，男，1966年生，复旦大学生物物理学士，中国科学院海洋研究所海洋生物学博士，加拿大英属哥伦比亚大学软件系统硕士；美国犹他大学医学院、加拿大英属哥伦比亚大学医学院、美国冷泉港实验室博士后；2006年起任加拿大西蒙菲沙大学理学院副教授、教授。2018年至今于中国科学院海洋所任研究员、课题组组长、硕士生博士生导师，研究领域为海洋生态学和海洋基因组学，研究方向为有害藻华暴发机理和生物多样性中心形成与演变的比较基因组学研究。

一、研究领域 

海洋生态学（海洋生态安全方向）

海洋生物学（遗传学与遗传工程；基因组学；生物信息学）               

二、招生专业及方向

1.博士及学术型硕士

海洋生物学，海洋生物多样性与进化方向

海洋生态学，海洋生态安全

2. 专业型硕士

生物与医药，海洋生物工程

三、研究室及联系方式      

海洋生态与环境科学重点实验室

邮件：chenn@qdio.ac.cn  电话：0532-82898680  

四、承担的主要科研项目

主持的科研项目包括：BR计划；国家自然科学基金（面上项目）；中国科学院任务/战略性先导科技专项（A类和B类）；青岛海洋科学与技术试点国家实验室“十四五”重大项目；青岛创业创新领军人才计划项目；青岛海洋科学与技术试点国家实验室主任基金等。                        

五、研究成果及奖励        

主要成果包括：

（1）系统构建了包括骨条藻、海链藻、菱形藻、伪菱形藻、角毛藻、海线藻、根管藻等代表性硅藻属物种的超级条形码（包括线粒体基因组、叶绿体基因组和核糖体基因簇）；

（2）通过比较基因组学分析构建了包括球形棕囊藻、浮动弯角藻、尖刺伪菱形藻等代表性有害藻华物种的高分辨率、高特异性分子标记；

（3）完成了包括胶州湾、北部湾、长江口、渤海、东海等代表性海域有害藻华物种的宏条形码分析；

（4）开发了高性能比较基因组学软件，并建立了超大规模环境基因组数据库。

主要奖励包括：

2007年入选加拿大司密斯健康研究基金会学者；2011年入选加拿大国家卫生研究院青年学者；2018年入选中国科学院BR计划；2019年荣获山东省TS荣誉称号。 

六、代表性论文及著作

[1] Yichao Wang, Jing Wang, Yang Chen, Shuya Liu,Yongfang Zhao, Nansheng Chen. 2022. Comparative Analysis of Bacillariophyceae Chloroplast Genomes Uncovers Extensive Genome Rearrangements Associated with Speciation. Int. J. Environ. Res. Public Health 19:10024. https://doi.org/10.3390/ijerph191610024 .

[2] Huiyin Song, Yiqi Wang, Xiangxiang Ding, Nansheng Chen. 2022. Genetic Analysis of a Large-Scale Phaeocystis globosa Bloom Offshore Qingdao, China. Microorganisms 10:1723. https://doi.org/10.3390/microorganisms10091723 .

[3] Ziyan He, Yang Chen, Yichao Wang, Kuiyan Liu, Qing Xu, Yang Li, Nansheng Chen. 2022. Comparative Analysis of Pseudo-nitzschia chloroplast genomes revealed extensive inverted region variation and Pseudo-nitzschia Speciation. Frontiers in Marine Science 9:784579.doi: 10.3389/fmars.2022.784579.

[4] Shuya Liu, Zongmei Cui, Yongfang Zhao, Nansheng Chen. 2022. Composition and spatial-temporal dynamics of phytoplankton community shaped by environmental selection and interactions in the Jiaozhou Bay. Water Research 218:118488. doi:10.1016/j.watres.2022.118488.

[5] Mengjia Zhang, Nansheng Chen. 2022. Comparative analysis of Thalassionema chloroplast genomes revealed hidden biodiversity. BMC Genomics 23: 327. doi:10.1186/s12864-022-08532-6.

[6] Kate Gibson, Huiyin Song, Nansheng Chen. 2022. Metabarcoding analysis of microbiome dynamics during a Phaeocystis globosa bloom in the Beibu Gulf, China. Harmful Algae  114:102217, doi:10.1016/j.hal.2022.102217.

[7] Yichao Wang, Shuya Liu, Jing Wang, Yanxin Yao, Yang Chen, Qing Xu, Zengxia Zhao, Nansheng Chen. 2022. Diatom Biodiversity and Speciation Revealed by Comparative Analysis of Mitochondrial Genomes, Frontiers in Plant Science 13:749982. doi:10.3389/fpls.2022.749982.

[8] Kuiyan Liu, Yang Chen, Zongmei Cui, Shuya Liu, Qing Xu, Nansheng Chen. 2021. Comparative analysis of chloroplast genomes of Thalassiosira species. Frontiers in Marine Science 8:788307. doi:10.3389/fmars.2021.788307.

[9] Shuya Liu, Qing Xu, Kuiyan Liu, Yongfang Zhao, Nansheng Chen. 2021. Chloroplast Genomes for five Skeletonema species: comparative and phylogenetic analysis, Frontiers in Plant Science 12:774617. doi:10.3389/fpls.2021.774617.

[10] Qing Xu, Zongmei Cui, Nansheng Chen. 2021. Comparative analysis of chloroplast genomes of seven Chaetoceros species revealed variation hotspots and speciation Time. Frontiers in Microbiology 12:742554. doi:10.3389/fmicb.2021.742554.

[11] Qing Xu, Chunzhi Wang, Kuidong Xu, Nansheng Chen. 2021. Metabarcoding analysis of harmful algal bloom species in the Western Pacific Seamount Regions, INT J ENV RES PUB HE 18(21):11470. doi:10.3390/ijerph182111470.

[12] Shuya Liu, Mengjia Zhang, Yongfang Zhao, Nansheng Chen. 2021. Biodiversity and spatial-temporal dynamics of Margalefidinium species in the Jiaozhou Bay, China. INT J ENV RES PUB HE 18(21):11637. doi:10.3390/ijerph182111637.

[13] Shuya Liu,Yichao Wang, Qing Xu, Mengjia Zhang and Nansheng Chen. 2021. Comparative analysis of full-length mitochondrial genomes of five Skeletonema species reveals conserved genome organization and recent speciation. BMC Genomics 22(1):746. doi: 10.1186/s12864-021-07999-z.

[14] Yang Chen, Qing Xu, Kate Gibson, Nansheng Chen. 2021. Metabarcoding dissection of harmful algal bloom species in the East China Sea off Southern Zhejiang Province in late spring, Marine Pollution Bulletin 169:112586. doi:10.1016/j.marpolbul.2021.112586.

[15] Huiyin Song, Yang Chen, Feng Liu, Nansheng Chen. 2021. Large Differences in the Haptophyte Phaeocystis globosa mitochondrial genomes driven by repeat amplifications. Frontiers in Microbiology 12:676447. doi:10.3389/fmicb.2021.676447.

[16] Huiyin Song, Yang Chen, Kate Gibson, Shuya Liu, Zhiming Yu, Nansheng Chen. 2021. High genetic diversity of the harmful algal bloom species Phaeocystis globosa revealed using the molecular marker COX1. Harmful Algae 107:102065. doi: 10.1016/j.hal.2021.102065.

[17] Xiaodong Wang, Huiyin Song, Yan Wang, Nansheng Chen. 2021. Research on the biology and ecology of the harmful algal bloom species Phaeocystis globosa in China: progresses in the last 20 years. Harmful Algae 107:102057. doi:10.1016/j.hal.2021.102057.

[18] Hailong Huang, Qing Xu, Kate Gibson, Yang Chen, Nansheng Chen. 2021. Molecular characterization of harmful algal blooms in the Bohai Sea using metabarcoding analysis. Harmful Algae 106:102066. doi:10.1016/j.hal.2021.102066. 

[19] Yichao Wang, Yang Chen, Jing Wang, Feng Liu, Nansheng Chen. 2021. Mitochondrial genome of the harmful algal bloom species Odontella regia (Mediophyceae, Bacillariophyta), Journal of Applied Phycology 33:855–868. doi:10.1007/s10811-020-02364-1.

[20] 陈楠生. 2021.海洋生物多样性中心形成与演变机制的比较基因组研究进展, 海洋与湖沼52(2): 274-286.

[21] 陈楠生,黄海龙.2021.中国海洋浮游植物和赤潮物种的生物多样性研究进展(一): 渤海, 海洋与湖沼52(2): 346-362.

[22] 陈楠生，陈阳.2021.中国海洋浮游植物和赤潮物种的生物多样性研究进展(二): 东海, 海洋与湖沼52(2): 363-384.

[23] 陈楠生，张梦佳.2021.中国海洋浮游植物和赤潮物种的生物多样性研究进展(三): 南海, 海洋与湖沼52(2): 385-401.

[24] 陈楠生，崔宗梅，徐青.2021.中国海洋浮游植物和赤潮物种的生物多样性研究进展(四): 长江口, 海洋与湖沼52(2): 402-417.

[25] Mengjia Zhang, Zongmei Cui, Feng Liu and Nansheng Chen. 2021. Definition of a high-resolution molecular marker for tracking the genetic diversity of the harmful algal species Eucampia zodiacus through comparative analysis of mitochondrial genomes, Frontiers in Microbiology 12:631144. doi: 10.3389/fmicb.2021.631144.

[26] Zongmei Cui, QingXu, Kate Gibson, Shuya Liu, Nansheng Chen. 2021. Metabarcoding analysis of harmful algal bloom species in the Changjiang Estuary, China. Science of the Total Environment 18(21): 11470. doi: 10.3390/ijerph182111470.

[27] Yang Chen, Yichao Wang, Kuiyan Liu,Feng Liu and Nansheng Chen. 2021. Development of a high-resolution molecular marker for tracking Pseudo-nitzschia pungens genetic diversity through comparative analysis of mitochondrial genomes. Journal of Applied Phycology 33:2283–2298. doi:10.1007/s10811-021-02461-9.

[28] Huiyin Song, Yang Chen, Feng Liu and Nansheng Chen. 2021. Large differences in the haptophyte Phaeocystis globosa mitochondrial genomes driven by repeat amplifications. Frontiers in Microbiology 12:676447. doi: 10.3389/fmicb.2021.676447.

[29] 刘淑雅, 陈楠生. 2021. 胶州湾海域浮游植物和赤潮物种的生物多样性研究进展. 海洋科学45(4):170-188.

[30] 王静, 王毅超, 王洪淑, 刘峰, 陈楠生. 2021我国新记录绿潮物种 Ulva laetevirens 的比较叶绿体基因组学研究. 海洋与湖沼52(5):1201-1213.

[31] 陈楠生. 2020. 有害藻华的宏条形码分析: 机会与挑战. 海洋科学 44 (7): 116-134.

[32] Guangyi Fan, Yue Song, Liandong Yang, Xiaoyun Huang, Suyu Zhang, Mengqi Zhang, Xianwei Yang, Yue Chang, He Zhang, Yongxin Li, Shanshan Liu, Lili Yu, Jeffery Chu, Inge Seim, Chenguang Feng, Thomas J Near, Rod A Wing, Wen Wang, Kun Wang, Jing Wang, Xun Xu, Huanming Yang, Xin Liu, Nansheng Chen, Shunping He.2020. Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K), GigaScience 9(8):giaa080. doi: 10.1093/gigascience/giaa080.

[33] Feng Liu, James T. Melton III, Juan M. Lopez-Bautista, Nansheng Chen. 2020. Multiple Intraspecific Variations of Mitochondrial Genomes in the Green-Tide Forming Alga, Ulva compressa Linnaeus (Ulvophyceae, Chlorophyta). Frontiers in Marine Science 7:714. doi:10.3389/fmars.2020.00714.

[34] Huiyin Song, Feng Liu, Zelin Li, Qing Xu, Yang Chen, Zhiming Yu, Nansheng Chen. 2020. Development of a high-resolution molecular marker for tracking Phaeocystis globosa genetic diversity through comparative analysis of chloroplast genomes. Harmful Algae 99:101911. doi: 10.1016/j.hal.2020.101911. 

[35] Shuya Liu, Kate Gibson, Zongmei Cui, Yang Chen, Xiaoxia Sun, Nansheng Chen. 2020. Metabarcoding analysis of harmful algal species in Jiaozhou Bay, Harmful Algae 92:101772.doi: 10.1016/j.hal.2020.101772.

[36] 俞志明，陈楠生. 2019. 国内外赤潮的发展趋势与研究热点, 海洋与湖沼50(3):475-486.

[37] Feng Liu, Shuya Liu, Tianyu Huang, Nansheng Chen. 2019. Construction and comparative analysis of mitochondrial genome in the brown tide forming alga Aureococcus anophagefferens (Pelagophyceae, Ochrophyta). Journal of Applied Phycology 32, pages441–450.

[38] Shengyong Xu, Shijun Xiao, Shilin Zhu, Xiaofei Zeng, Jing Luo, Jiaqi Liu, Tianxiang Gao, Nansheng Chen*. 2018. A draft genome assembly of the Chinese sillago (Sillago sinica), the first reference genome for Sillaginidae fishes. GigaScience 7(9). DOI: 10.1093/gigascience/giy108.